WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40F4.3.1 Sequence Name  F40F4.3.1
Length (nt)  555   Chromosome Location  X: 3259142-3259812
Chromosome . Primary Identifier  X Chromosome Location . Start  3259142
Chromosome Location . End  3259812 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002253 lbp-1 F40F4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40F4.3 F40F4.3 480   X: 3259158-3259469

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40F4.3.1 3259142 3259812 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228004   328   X: 3259142-3259469 Caenorhabditis elegans
Exon228005   114   X: 3259528-3259641 Caenorhabditis elegans
Exon228006   113   X: 3259700-3259812 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40F4.3.1 3259142 3259812 1

1 Sequence

Length
555

1 Sequence Ontology Term

Identifier Name Description
transcript