WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09C4.8.1 Sequence Name  K09C4.8.1
Length (nt)  2357   Chromosome Location  X: 3267294-3270906
Chromosome . Primary Identifier  X Chromosome Location . Start  3267294
Chromosome Location . End  3270906 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09C4.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006308 sul-1 K09C4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09C4.8 K09C4.8 2130   X: 3267381-3267572

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09C4.8.1 3267294 3270906 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228015   279   X: 3267294-3267572 Caenorhabditis elegans
Exon228016   109   X: 3267705-3267813 Caenorhabditis elegans
Exon228017   138   X: 3267861-3267998 Caenorhabditis elegans
Exon228018   57   X: 3268072-3268128 Caenorhabditis elegans
Exon228019   290   X: 3268180-3268469 Caenorhabditis elegans
Exon228020   127   X: 3268856-3268982 Caenorhabditis elegans
Exon228021   180   X: 3269028-3269207 Caenorhabditis elegans
Exon228022   176   X: 3269259-3269434 Caenorhabditis elegans
Exon228023   151   X: 3269503-3269653 Caenorhabditis elegans
Exon228024   170   X: 3269709-3269878 Caenorhabditis elegans
Exon228025   211   X: 3270070-3270280 Caenorhabditis elegans
Exon228026   114   X: 3270339-3270452 Caenorhabditis elegans
Exon228027   117   X: 3270499-3270615 Caenorhabditis elegans
Exon228028   238   X: 3270669-3270906 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09C4.8.1 3267294 3270906 -1

1 Sequence

Length
2357

1 Sequence Ontology Term

Identifier Name Description
transcript