WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09C4.10.1 Sequence Name  K09C4.10.1
Length (nt)  3339   Chromosome Location  X: 3276007-3280230
Chromosome . Primary Identifier  X Chromosome Location . Start  3276007
Chromosome Location . End  3280230 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09C4.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019554 K09C4.10 K09C4.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09C4.10 K09C4.10 3108   X: 3276207-3276391

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09C4.10.1 3276007 3280230 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228038   385   X: 3276007-3276391 Caenorhabditis elegans
Exon228039   81   X: 3276450-3276530 Caenorhabditis elegans
Exon228040   246   X: 3276583-3276828 Caenorhabditis elegans
Exon228041   158   X: 3276881-3277038 Caenorhabditis elegans
Exon228042   186   X: 3277122-3277307 Caenorhabditis elegans
Exon228043   1191   X: 3277362-3278552 Caenorhabditis elegans
Exon228044   96   X: 3278602-3278697 Caenorhabditis elegans
Exon228045   178   X: 3278746-3278923 Caenorhabditis elegans
Exon228046   197   X: 3278968-3279164 Caenorhabditis elegans
Exon228047   137   X: 3279225-3279361 Caenorhabditis elegans
Exon228048   82   X: 3279407-3279488 Caenorhabditis elegans
Exon228049   178   X: 3279537-3279714 Caenorhabditis elegans
Exon228050   136   X: 3279964-3280099 Caenorhabditis elegans
Exon228051   88   X: 3280143-3280230 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09C4.10.1 3276007 3280230 -1

1 Sequence

Length
3339

1 Sequence Ontology Term

Identifier Name Description
transcript