WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09C4.5.1 Sequence Name  K09C4.5.1
Length (nt)  1698   Chromosome Location  X: 3282631-3285721
Chromosome . Primary Identifier  X Chromosome Location . Start  3282631
Chromosome Location . End  3285721 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09C4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019550 K09C4.5 K09C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09C4.5 K09C4.5 1575   X: 3282674-3282843

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09C4.5.1 3282631 3285721 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228052   213   X: 3282631-3282843 Caenorhabditis elegans
Exon228053   120   X: 3282889-3283008 Caenorhabditis elegans
Exon228054   164   X: 3283057-3283220 Caenorhabditis elegans
Exon228055   52   X: 3283265-3283316 Caenorhabditis elegans
Exon228056   75   X: 3283514-3283588 Caenorhabditis elegans
Exon228057   125   X: 3283634-3283758 Caenorhabditis elegans
Exon228058   95   X: 3283812-3283906 Caenorhabditis elegans
Exon228059   111   X: 3283947-3284057 Caenorhabditis elegans
Exon228060   116   X: 3284104-3284219 Caenorhabditis elegans
Exon228061   80   X: 3284267-3284346 Caenorhabditis elegans
Exon228062   113   X: 3284910-3285022 Caenorhabditis elegans
Exon228063   134   X: 3285073-3285206 Caenorhabditis elegans
Exon228064   73   X: 3285255-3285327 Caenorhabditis elegans
Exon228065   45   X: 3285378-3285422 Caenorhabditis elegans
Exon228066   54   X: 3285483-3285536 Caenorhabditis elegans
Exon228067   128   X: 3285594-3285721 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09C4.5.1 3282631 3285721 1

1 Sequence

Length
1698

1 Sequence Ontology Term

Identifier Name Description
transcript