WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11D5.5.1 Sequence Name  F11D5.5.1
Length (nt)  1253   Chromosome Location  X: 3302070-3304031
Chromosome . Primary Identifier  X Chromosome Location . Start  3302070
Chromosome Location . End  3304031 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11D5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017382 F11D5.5 F11D5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11D5.5 F11D5.5 1149   X: 3302070-3302106

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11D5.5.1 3302070 3304031 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228115   37   X: 3302070-3302106 Caenorhabditis elegans
Exon228116   52   X: 3302150-3302201 Caenorhabditis elegans
Exon228117   75   X: 3302255-3302329 Caenorhabditis elegans
Exon228118   125   X: 3302378-3302502 Caenorhabditis elegans
Exon228119   95   X: 3302552-3302646 Caenorhabditis elegans
Exon228120   111   X: 3302699-3302809 Caenorhabditis elegans
Exon228121   116   X: 3302851-3302966 Caenorhabditis elegans
Exon228122   80   X: 3303014-3303093 Caenorhabditis elegans
Exon228123   113   X: 3303138-3303250 Caenorhabditis elegans
Exon228124   134   X: 3303396-3303529 Caenorhabditis elegans
Exon228125   73   X: 3303572-3303644 Caenorhabditis elegans
Exon228126   45   X: 3303692-3303736 Caenorhabditis elegans
Exon228127   54   X: 3303784-3303837 Caenorhabditis elegans
Exon228128   143   X: 3303889-3304031 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11D5.5.1 3302070 3304031 1

1 Sequence

Length
1253

1 Sequence Ontology Term

Identifier Name Description
transcript