WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK563.2.1 Sequence Name  ZK563.2.1
Length (nt)  1990   Chromosome Location  X: 3368959-3373296
Chromosome . Primary Identifier  X Chromosome Location . Start  3368959
Chromosome Location . End  3373296 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK563.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022767 ZK563.2 ZK563.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK563.2 ZK563.2 1761   X: 3368959-3369017

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK563.2.1 3368959 3373296 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228291   59   X: 3368959-3369017 Caenorhabditis elegans
Exon228292   80   X: 3369075-3369154 Caenorhabditis elegans
Exon228293   141   X: 3369202-3369342 Caenorhabditis elegans
Exon228294   132   X: 3369516-3369647 Caenorhabditis elegans
Exon228295   305   X: 3369695-3369999 Caenorhabditis elegans
Exon228299   109   X: 3371283-3371391 Caenorhabditis elegans
Exon228302   122   X: 3371596-3371717 Caenorhabditis elegans
Exon228303   123   X: 3371769-3371891 Caenorhabditis elegans
Exon228304   161   X: 3371946-3372106 Caenorhabditis elegans
Exon228305   127   X: 3372154-3372280 Caenorhabditis elegans
Exon228306   156   X: 3372618-3372773 Caenorhabditis elegans
Exon228307   475   X: 3372822-3373296 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK563.2.1 3368959 3373296 1

1 Sequence

Length
1990

1 Sequence Ontology Term

Identifier Name Description
transcript