WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK563.6.1 Sequence Name  ZK563.6.1
Length (nt)  1377   Chromosome Location  X: 3382868-3385462
Chromosome . Primary Identifier  X Chromosome Location . Start  3382868
Chromosome Location . End  3385462 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK563.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022770 acp-1 ZK563.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK563.6 ZK563.6 1281   X: 3382963-3383286

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK563.6.1 3382868 3385462 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228339   419   X: 3382868-3383286 Caenorhabditis elegans
Exon228340   135   X: 3383338-3383472 Caenorhabditis elegans
Exon228341   177   X: 3383523-3383699 Caenorhabditis elegans
Exon228342   171   X: 3383752-3383922 Caenorhabditis elegans
Exon228343   99   X: 3383971-3384069 Caenorhabditis elegans
Exon228344   117   X: 3384117-3384233 Caenorhabditis elegans
Exon228345   90   X: 3384281-3384370 Caenorhabditis elegans
Exon228346   93   X: 3384449-3384541 Caenorhabditis elegans
Exon228347   76   X: 3385387-3385462 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK563.6.1 3382868 3385462 -1

1 Sequence

Length
1377

1 Sequence Ontology Term

Identifier Name Description
transcript