WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK377.1.1 Sequence Name  ZK377.1.1
Length (nt)  1969   Chromosome Location  X: 3480250-3483666
Chromosome . Primary Identifier  X Chromosome Location . Start  3480250
Chromosome Location . End  3483666 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK377.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006952 wrt-6 ZK377.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK377.1 ZK377.1 1782   X: 3480254-3480389

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK377.1.1 3480250 3483666 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228476   140   X: 3480250-3480389 Caenorhabditis elegans
Exon228477   74   X: 3480436-3480509 Caenorhabditis elegans
Exon228478   260   X: 3481528-3481787 Caenorhabditis elegans
Exon228479   56   X: 3481841-3481896 Caenorhabditis elegans
Exon228480   208   X: 3481953-3482160 Caenorhabditis elegans
Exon228481   101   X: 3482212-3482312 Caenorhabditis elegans
Exon228482   47   X: 3482373-3482419 Caenorhabditis elegans
Exon228483   258   X: 3482487-3482744 Caenorhabditis elegans
Exon228484   290   X: 3482796-3483085 Caenorhabditis elegans
Exon228485   535   X: 3483132-3483666 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK377.1.1 3480250 3483666 1

1 Sequence

Length
1969

1 Sequence Ontology Term

Identifier Name Description
transcript