WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C12D12.2b.1 Sequence Name  C12D12.2b.1
Length (nt)  1761   Chromosome Location  X: 3496624-3499169
Chromosome . Primary Identifier  X Chromosome Location . Start  3496624
Chromosome Location . End  3499169 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C12D12.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001620 glt-1 C12D12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C12D12.2b C12D12.2b 1479   X: 3496624-3496731

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C12D12.2b.1 3496624 3499169 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228495   108   X: 3496624-3496731 Caenorhabditis elegans
Exon228497   180   X: 3497183-3497362 Caenorhabditis elegans
Exon228499   298   X: 3497414-3497711 Caenorhabditis elegans
Exon228501   361   X: 3497760-3498120 Caenorhabditis elegans
Exon228503   195   X: 3498166-3498360 Caenorhabditis elegans
Exon228505   135   X: 3498456-3498590 Caenorhabditis elegans
Exon228507   128   X: 3498638-3498765 Caenorhabditis elegans
Exon228509   356   X: 3498814-3499169 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C12D12.2b.1 3496624 3499169 1

1 Sequence

Length
1761

1 Sequence Ontology Term

Identifier Name Description
transcript