WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18B2.6.1 Sequence Name  C18B2.6.1
Length (nt)  1784   Chromosome Location  X: 3613353-3617318
Chromosome . Primary Identifier  X Chromosome Location . Start  3613353
Chromosome Location . End  3617318 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18B2.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015957 del-9 C18B2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18B2.6 C18B2.6 1740   X: 3613397-3613607

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18B2.6.1 3613353 3617318 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228856   255   X: 3613353-3613607 Caenorhabditis elegans
Exon228857   82   X: 3613903-3613984 Caenorhabditis elegans
Exon228858   142   X: 3614384-3614525 Caenorhabditis elegans
Exon228859   362   X: 3614577-3614938 Caenorhabditis elegans
Exon228860   157   X: 3615308-3615464 Caenorhabditis elegans
Exon228861   356   X: 3615521-3615876 Caenorhabditis elegans
Exon228862   266   X: 3615924-3616189 Caenorhabditis elegans
Exon228863   164   X: 3617155-3617318 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18B2.6.1 3613353 3617318 -1

1 Sequence

Length
1784

1 Sequence Ontology Term

Identifier Name Description
transcript