WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11G1.6b.1 Sequence Name  R11G1.6b.1
Length (nt)  3074   Chromosome Location  X: 3639166-3644885
Chromosome . Primary Identifier  X Chromosome Location . Start  3639166
Chromosome Location . End  3644885 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11G1.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020012 tmem-24 R11G1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11G1.6b R11G1.6b 2706   X: 3639504-3639579

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11G1.6b.1 3639166 3644885 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228886   414   X: 3639166-3639579 Caenorhabditis elegans
Exon228890   82   X: 3639639-3639720 Caenorhabditis elegans
Exon228895   77   X: 3639766-3639842 Caenorhabditis elegans
Exon228898   117   X: 3639932-3640048 Caenorhabditis elegans
Exon228902   213   X: 3640424-3640636 Caenorhabditis elegans
Exon228906   442   X: 3640679-3641120 Caenorhabditis elegans
Exon228910   338   X: 3641169-3641506 Caenorhabditis elegans
Exon228914   188   X: 3641551-3641738 Caenorhabditis elegans
Exon228918   150   X: 3641799-3641948 Caenorhabditis elegans
Exon228922   252   X: 3642569-3642820 Caenorhabditis elegans
Exon228926   120   X: 3642864-3642983 Caenorhabditis elegans
Exon228930   105   X: 3643035-3643139 Caenorhabditis elegans
Exon228934   154   X: 3643192-3643345 Caenorhabditis elegans
Exon228938   145   X: 3644362-3644506 Caenorhabditis elegans
Exon228941   277   X: 3644609-3644885 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11G1.6b.1 3639166 3644885 -1

1 Sequence

Length
3074

1 Sequence Ontology Term

Identifier Name Description
transcript