WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11G1.6d.1 Sequence Name  R11G1.6d.1
Length (nt)  2794   Chromosome Location  X: 3639168-3644511
Chromosome . Primary Identifier  X Chromosome Location . Start  3639168
Chromosome Location . End  3644511 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11G1.6d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020012 tmem-24 R11G1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11G1.6d R11G1.6d 2430   X: 3639504-3639579

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11G1.6d.1 3639168 3644511 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228887   412   X: 3639168-3639579 Caenorhabditis elegans
Exon228892   82   X: 3639639-3639720 Caenorhabditis elegans
Exon228894   71   X: 3639766-3639836 Caenorhabditis elegans
Exon228900   117   X: 3639932-3640048 Caenorhabditis elegans
Exon228904   213   X: 3640424-3640636 Caenorhabditis elegans
Exon228908   442   X: 3640679-3641120 Caenorhabditis elegans
Exon228912   338   X: 3641169-3641506 Caenorhabditis elegans
Exon228916   188   X: 3641551-3641738 Caenorhabditis elegans
Exon228920   150   X: 3641799-3641948 Caenorhabditis elegans
Exon228924   252   X: 3642569-3642820 Caenorhabditis elegans
Exon228928   120   X: 3642864-3642983 Caenorhabditis elegans
Exon228932   105   X: 3643035-3643139 Caenorhabditis elegans
Exon228936   154   X: 3643192-3643345 Caenorhabditis elegans
Exon228940   150   X: 3644362-3644511 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11G1.6d.1 3639168 3644511 -1

1 Sequence

Length
2794

1 Sequence Ontology Term

Identifier Name Description
transcript