WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11G1.1.1 Sequence Name  R11G1.1.1
Length (nt)  5583   Chromosome Location  X: 3659492-3667147
Chromosome . Primary Identifier  X Chromosome Location . Start  3659492
Chromosome Location . End  3667147 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11G1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020010 R11G1.1 R11G1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11G1.1 R11G1.1 5238   X: 3659492-3659561

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R11G1.1.1 3659492 3667147 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228980   70   X: 3659492-3659561 Caenorhabditis elegans
Exon228981   123   X: 3659607-3659729 Caenorhabditis elegans
Exon228982   126   X: 3659774-3659899 Caenorhabditis elegans
Exon228983   114   X: 3660163-3660276 Caenorhabditis elegans
Exon228984   1689   X: 3660445-3662133 Caenorhabditis elegans
Exon228985   98   X: 3662186-3662283 Caenorhabditis elegans
Exon228986   157   X: 3662331-3662487 Caenorhabditis elegans
Exon228987   169   X: 3662534-3662702 Caenorhabditis elegans
Exon228988   166   X: 3662748-3662913 Caenorhabditis elegans
Exon228989   207   X: 3662971-3663177 Caenorhabditis elegans
Exon228990   132   X: 3663236-3663367 Caenorhabditis elegans
Exon228991   183   X: 3663412-3663594 Caenorhabditis elegans
Exon228992   109   X: 3663653-3663761 Caenorhabditis elegans
Exon228993   154   X: 3663806-3663959 Caenorhabditis elegans
Exon228994   126   X: 3664723-3664848 Caenorhabditis elegans
Exon228995   786   X: 3664893-3665678 Caenorhabditis elegans
Exon228996   274   X: 3665735-3666008 Caenorhabditis elegans
Exon228997   253   X: 3666062-3666314 Caenorhabditis elegans
Exon228998   647   X: 3666501-3667147 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R11G1.1.1 3659492 3667147 1

1 Sequence

Length
5583

1 Sequence Ontology Term

Identifier Name Description
transcript