WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC64.3a.1 Sequence Name  ZC64.3a.1
Length (nt)  2535   Chromosome Location  X: 3843367-3857797
Chromosome . Primary Identifier  X Chromosome Location . Start  3843367
Chromosome Location . End  3857797 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC64.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000441 ceh-18 ZC64.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC64.3a ZC64.3a 1629   X: 3844219-3844277

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC64.3a.1 3843367 3857797 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229457   911   X: 3843367-3844277 Caenorhabditis elegans
Exon229460   67   X: 3844327-3844393 Caenorhabditis elegans
Exon229463   321   X: 3844438-3844758 Caenorhabditis elegans
Exon229466   527   X: 3844818-3845344 Caenorhabditis elegans
Exon229469   168   X: 3845390-3845557 Caenorhabditis elegans
Exon229473   176   X: 3848162-3848337 Caenorhabditis elegans
Exon229477   119   X: 3852577-3852695 Caenorhabditis elegans
Exon229481   146   X: 3856220-3856365 Caenorhabditis elegans
Exon229483   100   X: 3857698-3857797 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC64.3a.1 3843367 3857797 -1

1 Sequence

Length
2535

1 Sequence Ontology Term

Identifier Name Description
transcript