WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC64.4a.1 Sequence Name  ZC64.4a.1
Length (nt)  1666   Chromosome Location  X: 3869404-3873544
Chromosome . Primary Identifier  X Chromosome Location . Start  3869404
Chromosome Location . End  3873544 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC64.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002987 lim-4 ZC64.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC64.4a ZC64.4a 1068   X: 3869753-3869810

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC64.4a.1 3869404 3873544 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229494   407   X: 3869404-3869810 Caenorhabditis elegans
Exon229497   146   X: 3869854-3869999 Caenorhabditis elegans
Exon229500   99   X: 3870048-3870146 Caenorhabditis elegans
Exon229503   163   X: 3870193-3870355 Caenorhabditis elegans
Exon229508   150   X: 3870408-3870557 Caenorhabditis elegans
Exon229509   105   X: 3872370-3872474 Caenorhabditis elegans
Exon229512   77   X: 3872521-3872597 Caenorhabditis elegans
Exon229516   519   X: 3873026-3873544 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC64.4a.1 3869404 3873544 -1

1 Sequence

Length
1666

1 Sequence Ontology Term

Identifier Name Description
transcript