WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22B2.1.1 Sequence Name  T22B2.1.1
Length (nt)  2980   Chromosome Location  X: 3926076-3929574
Chromosome . Primary Identifier  X Chromosome Location . Start  3926076
Chromosome Location . End  3929574 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22B2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020665 T22B2.1 T22B2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22B2.1 T22B2.1 2868   X: 3926106-3926375

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22B2.1.1 3926076 3929574 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229665   300   X: 3926076-3926375 Caenorhabditis elegans
Exon229666   246   X: 3926428-3926673 Caenorhabditis elegans
Exon229667   282   X: 3926726-3927007 Caenorhabditis elegans
Exon229668   1211   X: 3927250-3928460 Caenorhabditis elegans
Exon229669   87   X: 3928513-3928599 Caenorhabditis elegans
Exon229670   84   X: 3928667-3928750 Caenorhabditis elegans
Exon229671   770   X: 3928805-3929574 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22B2.1.1 3926076 3929574 1

1 Sequence

Length
2980

1 Sequence Ontology Term

Identifier Name Description
transcript