WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19D2.1.1 Sequence Name  T19D2.1.1
Length (nt)  3235   Chromosome Location  X: 3931650-3937897
Chromosome . Primary Identifier  X Chromosome Location . Start  3931650
Chromosome Location . End  3937897 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19D2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020567 adt-3 T19D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19D2.1 T19D2.1 2823   X: 3931770-3931808

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19D2.1.1 3931650 3937897 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229673   159   X: 3931650-3931808 Caenorhabditis elegans
Exon229674   76   X: 3932035-3932110 Caenorhabditis elegans
Exon229675   132   X: 3932296-3932427 Caenorhabditis elegans
Exon229676   125   X: 3932646-3932770 Caenorhabditis elegans
Exon229677   118   X: 3933156-3933273 Caenorhabditis elegans
Exon229678   227   X: 3933334-3933560 Caenorhabditis elegans
Exon229679   84   X: 3934047-3934130 Caenorhabditis elegans
Exon229680   137   X: 3934175-3934311 Caenorhabditis elegans
Exon229681   144   X: 3934358-3934501 Caenorhabditis elegans
Exon229682   127   X: 3934551-3934677 Caenorhabditis elegans
Exon229683   180   X: 3934813-3934992 Caenorhabditis elegans
Exon229684   93   X: 3935039-3935131 Caenorhabditis elegans
Exon229685   173   X: 3935174-3935346 Caenorhabditis elegans
Exon229686   64   X: 3935390-3935453 Caenorhabditis elegans
Exon229687   231   X: 3935705-3935935 Caenorhabditis elegans
Exon229688   151   X: 3935986-3936136 Caenorhabditis elegans
Exon229689   63   X: 3936183-3936245 Caenorhabditis elegans
Exon229690   205   X: 3936358-3936562 Caenorhabditis elegans
Exon229691   80   X: 3936618-3936697 Caenorhabditis elegans
Exon229692   185   X: 3936741-3936925 Caenorhabditis elegans
Exon229693   145   X: 3937344-3937488 Caenorhabditis elegans
Exon229694   336   X: 3937562-3937897 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19D2.1.1 3931650 3937897 1

1 Sequence

Length
3235

1 Sequence Ontology Term

Identifier Name Description
transcript