WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R02E12.5.1 Sequence Name  R02E12.5.1
Length (nt)  1138   Chromosome Location  X: 3997340-3999341
Chromosome . Primary Identifier  X Chromosome Location . Start  3997340
Chromosome Location . End  3999341 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02E12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019829 R02E12.5 R02E12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R02E12.5 R02E12.5 264   X: 3997381-3997447

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R02E12.5.1 3997340 3999341 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229777   108   X: 3997340-3997447 Caenorhabditis elegans
Exon229778   103   X: 3997495-3997597 Caenorhabditis elegans
Exon229779   61   X: 3998366-3998426 Caenorhabditis elegans
Exon229780   866   X: 3998476-3999341 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R02E12.5.1 3997340 3999341 1

1 Sequence

Length
1138

1 Sequence Ontology Term

Identifier Name Description
transcript