WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R02E12.4.1 Sequence Name  R02E12.4.1
Length (nt)  1561   Chromosome Location  X: 4005314-4007715
Chromosome . Primary Identifier  X Chromosome Location . Start  4005314
Chromosome Location . End  4007715 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02E12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019828 R02E12.4 R02E12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R02E12.4 R02E12.4 1203   X: 4005591-4005599

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R02E12.4.1 4005314 4007715 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229787   286   X: 4005314-4005599 Caenorhabditis elegans
Exon229788   155   X: 4005709-4005863 Caenorhabditis elegans
Exon229789   399   X: 4005912-4006310 Caenorhabditis elegans
Exon229790   112   X: 4006355-4006466 Caenorhabditis elegans
Exon229791   123   X: 4006511-4006633 Caenorhabditis elegans
Exon229792   223   X: 4007176-4007398 Caenorhabditis elegans
Exon229793   263   X: 4007453-4007715 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R02E12.4.1 4005314 4007715 1

1 Sequence

Length
1561

1 Sequence Ontology Term

Identifier Name Description
transcript