WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T06F4.1d Sequence Name  T06F4.1d
Length (nt)  528   Chromosome Location  X: 4057613-4057656
Chromosome . Primary Identifier  X Chromosome Location . Start  4057613
Chromosome Location . End  4057656
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06F4.1d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53620 T06F4.1, isoform d 20.2 175 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052677
WBRNAi00018318
WBRNAi00021518
WBRNAi00035276

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T06F4.1d 4057613 4057656 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020294 T06F4.1 T06F4.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T06F4.1d 4057613 4057656 -1
CDS:T06F4.1d 4058168 4058261 -1
CDS:T06F4.1d 4058812 4058833 -1
CDS:T06F4.1d 4059124 4059230 -1
CDS:T06F4.1d 4060063 4060151 -1
CDS:T06F4.1d 4060938 4061035 -1
CDS:T06F4.1d 4061220 4061293 -1

1 Sequence

Length
528

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T06F4.1d.1 T06F4.1d.1 1526   X: 4056829-4061507