WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06F4.2b.1 Sequence Name  T06F4.2b.1
Length (nt)  3303   Chromosome Location  X: 4094867-4100536
Chromosome . Primary Identifier  X Chromosome Location . Start  4094867
Chromosome Location . End  4100536 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06F4.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000531 clh-4 T06F4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06F4.2b T06F4.2b 3258   X: 4094912-4095041

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T06F4.2b.1 4094867 4100536 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229881   175   X: 4094867-4095041 Caenorhabditis elegans
Exon229883   305   X: 4095278-4095582 Caenorhabditis elegans
Exon229885   192   X: 4095626-4095817 Caenorhabditis elegans
Exon229887   101   X: 4096225-4096325 Caenorhabditis elegans
Exon229889   75   X: 4096374-4096448 Caenorhabditis elegans
Exon229891   170   X: 4096494-4096663 Caenorhabditis elegans
Exon229893   125   X: 4096714-4096838 Caenorhabditis elegans
Exon229895   155   X: 4096886-4097040 Caenorhabditis elegans
Exon229897   131   X: 4097091-4097221 Caenorhabditis elegans
Exon229899   116   X: 4097268-4097383 Caenorhabditis elegans
Exon229901   159   X: 4097427-4097585 Caenorhabditis elegans
Exon229903   99   X: 4098009-4098107 Caenorhabditis elegans
Exon229905   153   X: 4098166-4098318 Caenorhabditis elegans
Exon229907   85   X: 4098363-4098447 Caenorhabditis elegans
Exon229909   184   X: 4098494-4098677 Caenorhabditis elegans
Exon229911   420   X: 4098977-4099396 Caenorhabditis elegans
Exon229913   273   X: 4099683-4099955 Caenorhabditis elegans
Exon229915   136   X: 4100008-4100143 Caenorhabditis elegans
Exon229917   92   X: 4100192-4100283 Caenorhabditis elegans
Exon229918   157   X: 4100380-4100536 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T06F4.2b.1 4094867 4100536 -1

1 Sequence

Length
3303

1 Sequence Ontology Term

Identifier Name Description
transcript