WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01H2.3a.1 Sequence Name  W01H2.3a.1
Length (nt)  1526   Chromosome Location  X: 4227810-4235846
Chromosome . Primary Identifier  X Chromosome Location . Start  4227810
Chromosome Location . End  4235846 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01H2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004285 rab-37 W01H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01H2.3a W01H2.3a 576   X: 4228528-4228639

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01H2.3a.1 4227810 4235846 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230137   830   X: 4227810-4228639 Caenorhabditis elegans
Exon230140   77   X: 4228786-4228862 Caenorhabditis elegans
Exon230146   117   X: 4229991-4230107 Caenorhabditis elegans
Exon230152   120   X: 4230155-4230274 Caenorhabditis elegans
Exon230158   42   X: 4230322-4230363 Caenorhabditis elegans
Exon230164   111   X: 4231100-4231210 Caenorhabditis elegans
Exon230172   138   X: 4235356-4235493 Caenorhabditis elegans
Exon230174   91   X: 4235756-4235846 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01H2.3a.1 4227810 4235846 -1

1 Sequence

Length
1526

1 Sequence Ontology Term

Identifier Name Description
transcript