WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00195898 Gene Name  W01H2.4
Sequence Name  ? W01H2.4 Organism  Caenorhabditis elegans
Automated Description  Is affected by elli-1 and daf-2 based on microarray studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 71
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00195898

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W01H2.4 W01H2.4 71   X: 4242538-4242608
 

Other

0 CDSs

0 RNAi Result

4 Allele

Public Name
gk963725
gk964260
gk670571
gk330325

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00195898 4242538 4242608 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_4242609..4244807   2199 X: 4242609-4244807 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in daf-2(e1370) comparing to in N2. Student's t-test, fold change > 2, p-value < 0.05. WBPaper00055386:daf-2(e1370)_upregulated
  Transcripts that showed significantly increased expression in elli-1(sam-3) comparing to in N2 animals, accordingto tiling array analysis. Fold change > 1.2, q-value < 0.05. WBPaper00050743:elli-1(sam-3)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00195898 4242538 4242608 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
71

1 Sequence Ontology Term