WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48D6.4a.1 Sequence Name  F48D6.4a.1
Length (nt)  513   Chromosome Location  X: 4246557-4247170
Chromosome . Primary Identifier  X Chromosome Location . Start  4246557
Chromosome Location . End  4247170 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48D6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018602 F48D6.4 F48D6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48D6.4a F48D6.4a 297   X: 4246737-4246836

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F48D6.4a.1 4246557 4247170 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230185   280   X: 4246557-4246836 Caenorhabditis elegans
Exon230186   129   X: 4246888-4247016 Caenorhabditis elegans
Exon230189   104   X: 4247067-4247170 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F48D6.4a.1 4246557 4247170 -1

1 Sequence

Length
513

1 Sequence Ontology Term

Identifier Name Description
transcript