WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48D6.3.1 Sequence Name  F48D6.3.1
Length (nt)  632   Chromosome Location  X: 4249249-4250766
Chromosome . Primary Identifier  X Chromosome Location . Start  4249249
Chromosome Location . End  4250766 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48D6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001957 hlh-13 F48D6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48D6.3 F48D6.3 444   X: 4249325-4249510

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F48D6.3.1 4249249 4250766 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230192   262   X: 4249249-4249510 Caenorhabditis elegans
Exon230193   107   X: 4249571-4249677 Caenorhabditis elegans
Exon230194   89   X: 4250457-4250545 Caenorhabditis elegans
Exon230195   174   X: 4250593-4250766 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F48D6.3.1 4249249 4250766 1

1 Sequence

Length
632

1 Sequence Ontology Term

Identifier Name Description
transcript