WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52B9.4.1 Sequence Name  C52B9.4.1
Length (nt)  1983   Chromosome Location  X: 4260652-4264580
Chromosome . Primary Identifier  X Chromosome Location . Start  4260652
Chromosome Location . End  4264580 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52B9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016867 C52B9.4 C52B9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52B9.4 C52B9.4 1677   X: 4260654-4260755

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C52B9.4.1 4260652 4264580 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230226   104   X: 4260652-4260755 Caenorhabditis elegans
Exon230227   93   X: 4260804-4260896 Caenorhabditis elegans
Exon230228   78   X: 4261053-4261130 Caenorhabditis elegans
Exon230229   264   X: 4261181-4261444 Caenorhabditis elegans
Exon230230   113   X: 4261494-4261606 Caenorhabditis elegans
Exon230231   104   X: 4262203-4262306 Caenorhabditis elegans
Exon230232   275   X: 4262412-4262686 Caenorhabditis elegans
Exon230233   260   X: 4263380-4263639 Caenorhabditis elegans
Exon230234   140   X: 4263686-4263825 Caenorhabditis elegans
Exon230235   128   X: 4263984-4264111 Caenorhabditis elegans
Exon230236   424   X: 4264157-4264580 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C52B9.4.1 4260652 4264580 1

1 Sequence

Length
1983

1 Sequence Ontology Term

Identifier Name Description
transcript