WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52B9.7b.1 Sequence Name  C52B9.7b.1
Length (nt)  649   Chromosome Location  X: 4293193-4294343
Chromosome . Primary Identifier  X Chromosome Location . Start  4293193
Chromosome Location . End  4294343 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52B9.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003907 paf-2 C52B9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52B9.7b C52B9.7b 573   X: 4293269-4293410

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C52B9.7b.1 4293193 4294343 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230360   218   X: 4293193-4293410 Caenorhabditis elegans
Exon230365   156   X: 4293459-4293614 Caenorhabditis elegans
Exon230368   128   X: 4293671-4293798 Caenorhabditis elegans
Exon230369   147   X: 4294197-4294343 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C52B9.7b.1 4293193 4294343 -1

1 Sequence

Length
649

1 Sequence Ontology Term

Identifier Name Description
transcript