WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24A8.3.1 Sequence Name  C24A8.3.1
Length (nt)  6742   Chromosome Location  X: 4297869-4306961
Chromosome . Primary Identifier  X Chromosome Location . Start  4297869
Chromosome Location . End  4306961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24A8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004106 pqn-15 C24A8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24A8.3 C24A8.3 6516   X: 4298095-4299255

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C24A8.3.1 4297869 4306961 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230377   1387   X: 4297869-4299255 Caenorhabditis elegans
Exon230378   145   X: 4299303-4299447 Caenorhabditis elegans
Exon230379   141   X: 4299517-4299657 Caenorhabditis elegans
Exon230380   540   X: 4299703-4300242 Caenorhabditis elegans
Exon230381   437   X: 4300317-4300753 Caenorhabditis elegans
Exon230382   387   X: 4301205-4301591 Caenorhabditis elegans
Exon230383   919   X: 4301637-4302555 Caenorhabditis elegans
Exon230384   80   X: 4302600-4302679 Caenorhabditis elegans
Exon230385   261   X: 4302984-4303244 Caenorhabditis elegans
Exon230386   1338   X: 4303289-4304626 Caenorhabditis elegans
Exon230387   75   X: 4304680-4304754 Caenorhabditis elegans
Exon230388   201   X: 4305221-4305421 Caenorhabditis elegans
Exon230389   51   X: 4305472-4305522 Caenorhabditis elegans
Exon230390   54   X: 4305593-4305646 Caenorhabditis elegans
Exon230391   51   X: 4305691-4305741 Caenorhabditis elegans
Exon230392   54   X: 4306018-4306071 Caenorhabditis elegans
Exon230393   48   X: 4306120-4306167 Caenorhabditis elegans
Exon230394   573   X: 4306389-4306961 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C24A8.3.1 4297869 4306961 -1

1 Sequence

Length
6742

1 Sequence Ontology Term

Identifier Name Description
transcript