WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52B9.8.1 Sequence Name  C52B9.8.1
Length (nt)  1166   Chromosome Location  X: 4307770-4311768
Chromosome . Primary Identifier  X Chromosome Location . Start  4307770
Chromosome Location . End  4311768 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52B9.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016868 C52B9.8 C52B9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52B9.8 C52B9.8 1083   X: 4307851-4307970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C52B9.8.1 4307770 4311768 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230395   201   X: 4307770-4307970 Caenorhabditis elegans
Exon230396   122   X: 4308198-4308319 Caenorhabditis elegans
Exon230397   129   X: 4308367-4308495 Caenorhabditis elegans
Exon230398   124   X: 4308547-4308670 Caenorhabditis elegans
Exon230399   99   X: 4308719-4308817 Caenorhabditis elegans
Exon230400   104   X: 4309245-4309348 Caenorhabditis elegans
Exon230401   80   X: 4309608-4309687 Caenorhabditis elegans
Exon230402   86   X: 4310313-4310398 Caenorhabditis elegans
Exon230403   93   X: 4310441-4310533 Caenorhabditis elegans
Exon230404   128   X: 4311641-4311768 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C52B9.8.1 4307770 4311768 -1

1 Sequence

Length
1166

1 Sequence Ontology Term

Identifier Name Description
transcript