WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14H12.4b.1 Sequence Name  F14H12.4b.1
Length (nt)  1700   Chromosome Location  X: 4339632-4343706
Chromosome . Primary Identifier  X Chromosome Location . Start  4339632
Chromosome Location . End  4343706 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14H12.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017472 cst-1 F14H12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14H12.4b F14H12.4b 1494   X: 4339644-4339693

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14H12.4b.1 4339632 4343706 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230474   62   X: 4339632-4339693 Caenorhabditis elegans
Exon230477   81   X: 4339760-4339840 Caenorhabditis elegans
Exon230479   181   X: 4339887-4340067 Caenorhabditis elegans
Exon230481   156   X: 4340340-4340495 Caenorhabditis elegans
Exon230483   378   X: 4340538-4340915 Caenorhabditis elegans
Exon230485   93   X: 4341802-4341894 Caenorhabditis elegans
Exon230487   91   X: 4341943-4342033 Caenorhabditis elegans
Exon230489   81   X: 4342203-4342283 Caenorhabditis elegans
Exon230490   168   X: 4342326-4342493 Caenorhabditis elegans
Exon230493   65   X: 4342837-4342901 Caenorhabditis elegans
Exon230495   89   X: 4342949-4343037 Caenorhabditis elegans
Exon230497   255   X: 4343452-4343706 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14H12.4b.1 4339632 4343706 1

1 Sequence

Length
1700

1 Sequence Ontology Term

Identifier Name Description
transcript