WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R160.1b.1 Sequence Name  R160.1b.1
Length (nt)  1949   Chromosome Location  X: 4389365-4393796
Chromosome . Primary Identifier  X Chromosome Location . Start  4389365
Chromosome Location . End  4393796 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R160.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001082 dpy-23 R160.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R160.1b R160.1b 1308   X: 4389376-4389449

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R160.1b.1 4389365 4393796 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230558   85   X: 4389365-4389449 Caenorhabditis elegans
Exon230560   166   X: 4389692-4389857 Caenorhabditis elegans
Exon230562   183   X: 4389907-4390089 Caenorhabditis elegans
Exon230565   136   X: 4391039-4391174 Caenorhabditis elegans
Exon230567   142   X: 4391225-4391366 Caenorhabditis elegans
Exon230569   120   X: 4391416-4391535 Caenorhabditis elegans
Exon230571   85   X: 4391583-4391667 Caenorhabditis elegans
Exon230573   149   X: 4391719-4391867 Caenorhabditis elegans
Exon230575   118   X: 4392864-4392981 Caenorhabditis elegans
Exon230576   765   X: 4393032-4393796 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R160.1b.1 4389365 4393796 1

1 Sequence

Length
1949

1 Sequence Ontology Term

Identifier Name Description
transcript