WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02E8.2a.1 Sequence Name  F02E8.2a.1
Length (nt)  1835   Chromosome Location  X: 4466518-4469013
Chromosome . Primary Identifier  X Chromosome Location . Start  4466518
Chromosome Location . End  4469013 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02E8.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017176 nmur-3 F02E8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02E8.2a F02E8.2a 1338   X: 4466825-4466911

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F02E8.2a.1 4466518 4469013 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230775   394   X: 4466518-4466911 Caenorhabditis elegans
Exon230777   119   X: 4466959-4467077 Caenorhabditis elegans
Exon230779   100   X: 4467435-4467534 Caenorhabditis elegans
Exon230781   151   X: 4467579-4467729 Caenorhabditis elegans
Exon230783   185   X: 4467776-4467960 Caenorhabditis elegans
Exon230786   430   X: 4468032-4468461 Caenorhabditis elegans
Exon230788   123   X: 4468512-4468634 Caenorhabditis elegans
Exon230790   333   X: 4468681-4469013 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F02E8.2a.1 4466518 4469013 1

1 Sequence

Length
1835

1 Sequence Ontology Term

Identifier Name Description
transcript