WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46H6.2a.1 Sequence Name  F46H6.2a.1
Length (nt)  2208   Chromosome Location  X: 4494919-4504388
Chromosome . Primary Identifier  X Chromosome Location . Start  4494919
Chromosome Location . End  4504388 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46H6.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000959 dgk-2 F46H6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46H6.2a F46H6.2a 1611   X: 4495226-4495340

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46H6.2a.1 4494919 4504388 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230850   422   X: 4494919-4495340 Caenorhabditis elegans
Exon230852   185   X: 4495393-4495577 Caenorhabditis elegans
Exon230855   172   X: 4495629-4495800 Caenorhabditis elegans
Exon230858   128   X: 4496021-4496148 Caenorhabditis elegans
Exon230861   75   X: 4496256-4496330 Caenorhabditis elegans
Exon230866   90   X: 4496381-4496470 Caenorhabditis elegans
Exon230869   288   X: 4496542-4496829 Caenorhabditis elegans
Exon230874   133   X: 4497237-4497369 Caenorhabditis elegans
Exon230881   89   X: 4502344-4502432 Caenorhabditis elegans
Exon230883   87   X: 4502485-4502571 Caenorhabditis elegans
Exon230885   116   X: 4503644-4503759 Caenorhabditis elegans
Exon230887   423   X: 4503966-4504388 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46H6.2a.1 4494919 4504388 -1

1 Sequence

Length
2208

1 Sequence Ontology Term

Identifier Name Description
transcript