WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46H6.2c.1 Sequence Name  F46H6.2c.1
Length (nt)  1491   Chromosome Location  X: 4494921-4497369
Chromosome . Primary Identifier  X Chromosome Location . Start  4494921
Chromosome Location . End  4497369 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46H6.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000959 dgk-2 F46H6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46H6.2c F46H6.2c 1056   X: 4495226-4495340

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46H6.2c.1 4494921 4497369 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230851   420   X: 4494921-4495340 Caenorhabditis elegans
Exon230853   185   X: 4495393-4495577 Caenorhabditis elegans
Exon230856   172   X: 4495629-4495800 Caenorhabditis elegans
Exon230859   128   X: 4496021-4496148 Caenorhabditis elegans
Exon230862   75   X: 4496256-4496330 Caenorhabditis elegans
Exon230867   90   X: 4496381-4496470 Caenorhabditis elegans
Exon230872   288   X: 4496542-4496829 Caenorhabditis elegans
Exon230877   133   X: 4497237-4497369 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46H6.2c.1 4494921 4497369 -1

1 Sequence

Length
1491

1 Sequence Ontology Term

Identifier Name Description
transcript