WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C07A12.7a Sequence Name  C07A12.7a
Length (nt)  1314   Chromosome Location  X: 4517899-4517933
Chromosome . Primary Identifier  X Chromosome Location . Start  4517899
Chromosome Location . End  4517933
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07A12.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25764 TMYB-1, isoform a 48.5 437 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00028614
WBRNAi00095032
WBRNAi00010359
WBRNAi00039965
WBRNAi00039966

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C07A12.7a 4517899 4517933 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015561 tmyb-1 C07A12.7 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C07A12.7a 4517899 4517933 -1
CDS:C07A12.7a 4518002 4518178 -1
CDS:C07A12.7a 4518223 4518378 -1
CDS:C07A12.7a 4518427 4518685 -1
CDS:C07A12.7a 4519352 4519453 -1
CDS:C07A12.7a 4519521 4519887 -1
CDS:C07A12.7a 4519937 4520024 -1
CDS:C07A12.7a 4520919 4521048 -1

1 Sequence

Length
1314

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C07A12.7a.2 C07A12.7a.2 1600   X: 4517739-4522144
Transcript:C07A12.7a.1 C07A12.7a.1 1467   X: 4517747-4521049