WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07A12.4.1 Sequence Name  C07A12.4.1
Length (nt)  1898   Chromosome Location  X: 4524155-4526536
Chromosome . Primary Identifier  X Chromosome Location . Start  4524155
Chromosome Location . End  4526536 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07A12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003963 pdi-2 C07A12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07A12.4 C07A12.4 1482   X: 4524239-4524328

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07A12.4.1 4524155 4526536 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230929   174   X: 4524155-4524328 Caenorhabditis elegans
Exon230931   384   X: 4524498-4524881 Caenorhabditis elegans
Exon230933   807   X: 4525147-4525953 Caenorhabditis elegans
Exon230936   533   X: 4526004-4526536 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07A12.4.1 4524155 4526536 1

1 Sequence

Length
1898

1 Sequence Ontology Term

Identifier Name Description
transcript