WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C07A12.1a Sequence Name  C07A12.1a
Length (nt)  1173   Chromosome Location  X: 4554694-4554853
Chromosome . Primary Identifier  X Chromosome Location . Start  4554694
Chromosome Location . End  4554853
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07A12.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39669 HAM-2, isoform a 43.5 390 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00039960
WBRNAi00010356
WBRNAi00070163
WBRNAi00115864
WBRNAi00028610

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C07A12.1a 4554694 4554853 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001821 ham-2 C07A12.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C07A12.1a 4554694 4554853 1
CDS:C07A12.1a 4557112 4557285 1
CDS:C07A12.1a 4557340 4557605 1
CDS:C07A12.1a 4557656 4557838 1
CDS:C07A12.1a 4557931 4558074 1
CDS:C07A12.1a 4558566 4558811 1

1 Sequence

Length
1173

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C07A12.1a.1 C07A12.1a.1 1771   X: 4554689-4559404