WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T13H2.5b Sequence Name  T13H2.5b
Length (nt)  3279   Chromosome Location  X: 4596199-4596384
Chromosome . Primary Identifier  X Chromosome Location . Start  4596199
Chromosome Location . End  4596384
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13H2.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31236 SPAT-3, isoform b 120.5 1092 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00053292
WBRNAi00018696
WBRNAi00076677
WBRNAi00065860
WBRNAi00077114
WBRNAi00063638

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T13H2.5b 4596199 4596384 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020496 spat-3 T13H2.5 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:T13H2.5b 4596199 4596384 -1
CDS:T13H2.5b 4596435 4596508 -1
CDS:T13H2.5b 4596565 4596673 -1
CDS:T13H2.5b 4596723 4597965 -1
CDS:T13H2.5b 4598010 4598479 -1
CDS:T13H2.5b 4598614 4598667 -1
CDS:T13H2.5b 4598750 4598922 -1
CDS:T13H2.5b 4598972 4599127 -1
CDS:T13H2.5b 4599176 4599989 -1

1 Sequence

Length
3279

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T13H2.5b.1 T13H2.5b.1 3279   X: 4596199-4599989