WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00196407 Gene Name  T13H2.7
Sequence Name  ? T13H2.7 Organism  Caenorhabditis elegans
Automated Description  Enriched in AFD and PLM based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 155
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00196407

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T13H2.7 T13H2.7 155   X: 4606507-4606661
 

Other

0 CDSs

0 RNAi Result

2 Allele

Public Name
gk964260
gk962667

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00196407 4606507 4606661 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_4605929..4606506   578 X: 4605929-4606506 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in PLM neuron cells comparing to in whole animal, according to dissected single neuron RNASeq analysis. Fold change >= 4. WBPaper00050344:PLM-neuron_enriched
  Transcripts that showed significantly increased expression in AFD neuron cells comparing to in whole animal, according to dissected single neuron RNASeq analysis. Fold change >= 4. WBPaper00050344:AFD-neuron_enriched

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00196407 4606507 4606661 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
155

1 Sequence Ontology Term