WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46C11.4.1 Sequence Name  C46C11.4.1
Length (nt)  1379   Chromosome Location  X: 4644308-4647204
Chromosome . Primary Identifier  X Chromosome Location . Start  4644308
Chromosome Location . End  4647204 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46C11.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044567 C46C11.4 C46C11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46C11.4 C46C11.4 1197   X: 4644404-4644533

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46C11.4.1 4644308 4647204 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231249   226   X: 4644308-4644533 Caenorhabditis elegans
Exon231250   272   X: 4645070-4645341 Caenorhabditis elegans
Exon231251   310   X: 4645727-4646036 Caenorhabditis elegans
Exon231252   291   X: 4646179-4646469 Caenorhabditis elegans
Exon231253   77   X: 4646697-4646773 Caenorhabditis elegans
Exon231254   203   X: 4647002-4647204 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46C11.4.1 4644308 4647204 -1

1 Sequence

Length
1379

1 Sequence Ontology Term

Identifier Name Description
transcript