WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02G10.5c.1 Sequence Name  K02G10.5c.1
Length (nt)  2181   Chromosome Location  X: 4687763-4691198
Chromosome . Primary Identifier  X Chromosome Location . Start  4687763
Chromosome Location . End  4691198 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02G10.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019346 K02G10.5 K02G10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02G10.5c K02G10.5c 1929   X: 4688008-4688049

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02G10.5c.1 4687763 4691198 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231315   287   X: 4687763-4688049 Caenorhabditis elegans
Exon231317   143   X: 4688103-4688245 Caenorhabditis elegans
Exon231319   376   X: 4688685-4689060 Caenorhabditis elegans
Exon231321   133   X: 4689106-4689238 Caenorhabditis elegans
Exon231323   193   X: 4689300-4689492 Caenorhabditis elegans
Exon231325   145   X: 4689536-4689680 Caenorhabditis elegans
Exon231327   98   X: 4689728-4689825 Caenorhabditis elegans
Exon231329   125   X: 4689871-4689995 Caenorhabditis elegans
Exon231331   100   X: 4690043-4690142 Caenorhabditis elegans
Exon231333   122   X: 4690190-4690311 Caenorhabditis elegans
Exon231335   184   X: 4690409-4690592 Caenorhabditis elegans
Exon231337   98   X: 4690637-4690734 Caenorhabditis elegans
Exon231339   177   X: 4691022-4691198 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02G10.5c.1 4687763 4691198 -1

1 Sequence

Length
2181

1 Sequence Ontology Term

Identifier Name Description
transcript