WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55D10.3.1 Sequence Name  F55D10.3.1
Length (nt)  2434   Chromosome Location  X: 4712279-4715080
Chromosome . Primary Identifier  X Chromosome Location . Start  4712279
Chromosome Location . End  4715080 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55D10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018878 glit-1 F55D10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55D10.3 F55D10.3 2193   X: 4712296-4712439

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55D10.3.1 4712279 4715080 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231393   161   X: 4712279-4712439 Caenorhabditis elegans
Exon231394   231   X: 4712701-4712931 Caenorhabditis elegans
Exon231395   168   X: 4712986-4713153 Caenorhabditis elegans
Exon231396   1874   X: 4713207-4715080 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55D10.3.1 4712279 4715080 1

1 Sequence

Length
2434

1 Sequence Ontology Term

Identifier Name Description
transcript