WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55D10.1 Sequence Name  F55D10.1
Length (nt)  2868   Chromosome Location  X: 4733100-4733171
Chromosome . Primary Identifier  X Chromosome Location . Start  4733100
Chromosome Location . End  4733171
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55D10.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28456 AMAN-1 109.4 955 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00048493
WBRNAi00015725
WBRNAi00076484
WBRNAi00081081

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55D10.1 4733100 4733171 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018877 aman-1 F55D10.1 Caenorhabditis elegans

21 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55D10.1 4733100 4733171 1
CDS:F55D10.1 4733898 4734006 1
CDS:F55D10.1 4734062 4734143 1
CDS:F55D10.1 4734197 4734383 1
CDS:F55D10.1 4734522 4734620 1
CDS:F55D10.1 4734671 4734779 1
CDS:F55D10.1 4734827 4734993 1
CDS:F55D10.1 4735339 4735455 1
CDS:F55D10.1 4735504 4735808 1
CDS:F55D10.1 4735851 4735920 1
CDS:F55D10.1 4735971 4736071 1
CDS:F55D10.1 4736116 4736245 1
CDS:F55D10.1 4736637 4736822 1
CDS:F55D10.1 4736869 4737075 1
CDS:F55D10.1 4737127 4737251 1
CDS:F55D10.1 4737293 4737394 1
CDS:F55D10.1 4737450 4737615 1
CDS:F55D10.1 4737664 4737786 1
CDS:F55D10.1 4737989 4738234 1
CDS:F55D10.1 4738283 4738361 1
CDS:F55D10.1 4738408 4738493 1

1 Sequence

Length
2868

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55D10.1.1 F55D10.1.1 2972   X: 4733095-4738592