WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43C9.3.1 Sequence Name  F43C9.3.1
Length (nt)  2562   Chromosome Location  X: 4777512-4782297
Chromosome . Primary Identifier  X Chromosome Location . Start  4777512
Chromosome Location . End  4782297 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43C9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018377 hum-10 F43C9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43C9.3 F43C9.3 2562   X: 4777512-4777672

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F43C9.3.1 4777512 4782297 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231492   161   X: 4777512-4777672 Caenorhabditis elegans
Exon231493   131   X: 4777821-4777951 Caenorhabditis elegans
Exon231494   104   X: 4777997-4778100 Caenorhabditis elegans
Exon231495   216   X: 4778477-4778692 Caenorhabditis elegans
Exon231496   103   X: 4778737-4778839 Caenorhabditis elegans
Exon231497   62   X: 4778883-4778944 Caenorhabditis elegans
Exon231498   279   X: 4778988-4779266 Caenorhabditis elegans
Exon231499   80   X: 4779325-4779404 Caenorhabditis elegans
Exon231500   79   X: 4779929-4780007 Caenorhabditis elegans
Exon231501   427   X: 4780063-4780489 Caenorhabditis elegans
Exon231502   134   X: 4780533-4780666 Caenorhabditis elegans
Exon231503   107   X: 4781291-4781397 Caenorhabditis elegans
Exon231504   147   X: 4781446-4781592 Caenorhabditis elegans
Exon231505   231   X: 4781636-4781866 Caenorhabditis elegans
Exon231506   101   X: 4781908-4782008 Caenorhabditis elegans
Exon231507   98   X: 4782051-4782148 Caenorhabditis elegans
Exon231508   102   X: 4782196-4782297 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F43C9.3.1 4777512 4782297 -1

1 Sequence

Length
2562

1 Sequence Ontology Term

Identifier Name Description
transcript