WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08E3.1b.2 Sequence Name  R08E3.1b.2
Length (nt)  6511   Chromosome Location  X: 4822655-4834873
Chromosome . Primary Identifier  X Chromosome Location . Start  4822655
Chromosome Location . End  4834873 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08E3.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019957 R08E3.1 R08E3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08E3.1b R08E3.1b 5691   X: 4822662-4822755

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R08E3.1b.2 4822655 4834873 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

45 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231608   101   X: 4822655-4822755 Caenorhabditis elegans
Exon231612   192   X: 4822803-4822994 Caenorhabditis elegans
Exon231615   191   X: 4823317-4823507 Caenorhabditis elegans
Exon231618   156   X: 4823556-4823711 Caenorhabditis elegans
Exon231621   96   X: 4823758-4823853 Caenorhabditis elegans
Exon231624   135   X: 4824250-4824384 Caenorhabditis elegans
Exon231627   133   X: 4824430-4824562 Caenorhabditis elegans
Exon231630   64   X: 4824613-4824676 Caenorhabditis elegans
Exon231633   167   X: 4824723-4824889 Caenorhabditis elegans
Exon231636   188   X: 4824938-4825125 Caenorhabditis elegans
Exon231639   70   X: 4825172-4825241 Caenorhabditis elegans
Exon231642   75   X: 4825810-4825884 Caenorhabditis elegans
Exon231645   91   X: 4825936-4826026 Caenorhabditis elegans
Exon231648   139   X: 4826070-4826208 Caenorhabditis elegans
Exon231651   142   X: 4826261-4826402 Caenorhabditis elegans
Exon231654   92   X: 4826450-4826541 Caenorhabditis elegans
Exon231657   123   X: 4826596-4826718 Caenorhabditis elegans
Exon231660   166   X: 4827202-4827367 Caenorhabditis elegans
Exon231663   137   X: 4827418-4827554 Caenorhabditis elegans
Exon231666   103   X: 4827600-4827702 Caenorhabditis elegans
Exon231669   92   X: 4827756-4827847 Caenorhabditis elegans
Exon231672   111   X: 4827898-4828008 Caenorhabditis elegans
Exon231675   99   X: 4828109-4828207 Caenorhabditis elegans
Exon231678   73   X: 4828250-4828322 Caenorhabditis elegans
Exon231681   66   X: 4828366-4828431 Caenorhabditis elegans
Exon231684   153   X: 4828475-4828627 Caenorhabditis elegans
Exon231687   170   X: 4828699-4828868 Caenorhabditis elegans
Exon231690   204   X: 4829234-4829437 Caenorhabditis elegans
Exon231693   196   X: 4829484-4829679 Caenorhabditis elegans
Exon231696   66   X: 4829732-4829797 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R08E3.1b.2 4822655 4834873 1

1 Sequence

Length
6511

1 Sequence Ontology Term

Identifier Name Description
transcript