WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39C12.1.1 Sequence Name  F39C12.1.1
Length (nt)  15617   Chromosome Location  X: 4834868-4853195
Chromosome . Primary Identifier  X Chromosome Location . Start  4834868
Chromosome Location . End  4853195 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39C12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018193 F39C12.1 F39C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39C12.1 F39C12.1 15348   X: 4835007-4835264

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F39C12.1.1 4834868 4853195 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231745   397   X: 4834868-4835264 Caenorhabditis elegans
Exon231746   147   X: 4835314-4835460 Caenorhabditis elegans
Exon231747   249   X: 4835684-4835932 Caenorhabditis elegans
Exon231748   136   X: 4835987-4836122 Caenorhabditis elegans
Exon231749   170   X: 4836172-4836341 Caenorhabditis elegans
Exon231750   249   X: 4836470-4836718 Caenorhabditis elegans
Exon231751   304   X: 4836778-4837081 Caenorhabditis elegans
Exon231752   101   X: 4837126-4837226 Caenorhabditis elegans
Exon231753   444   X: 4837273-4837716 Caenorhabditis elegans
Exon231754   165   X: 4837759-4837923 Caenorhabditis elegans
Exon231755   7581   X: 4837973-4845553 Caenorhabditis elegans
Exon231756   159   X: 4845902-4846060 Caenorhabditis elegans
Exon231757   387   X: 4846110-4846496 Caenorhabditis elegans
Exon231758   884   X: 4846570-4847453 Caenorhabditis elegans
Exon231759   373   X: 4847517-4847889 Caenorhabditis elegans
Exon231760   456   X: 4847936-4848391 Caenorhabditis elegans
Exon231761   309   X: 4848448-4848756 Caenorhabditis elegans
Exon231762   177   X: 4848810-4848986 Caenorhabditis elegans
Exon231763   1202   X: 4849034-4850235 Caenorhabditis elegans
Exon231764   87   X: 4850286-4850372 Caenorhabditis elegans
Exon231765   172   X: 4850417-4850588 Caenorhabditis elegans
Exon231766   222   X: 4850640-4850861 Caenorhabditis elegans
Exon231767   115   X: 4850908-4851022 Caenorhabditis elegans
Exon231768   450   X: 4851071-4851520 Caenorhabditis elegans
Exon231769   96   X: 4851575-4851670 Caenorhabditis elegans
Exon231770   117   X: 4852438-4852554 Caenorhabditis elegans
Exon231771   197   X: 4852601-4852797 Caenorhabditis elegans
Exon231772   85   X: 4852854-4852938 Caenorhabditis elegans
Exon231773   186   X: 4853010-4853195 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F39C12.1.1 4834868 4853195 -1

1 Sequence

Length
15617

1 Sequence Ontology Term

Identifier Name Description
transcript