WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07F12.3.1 Sequence Name  T07F12.3.1
Length (nt)  1628   Chromosome Location  X: 4885951-4889575
Chromosome . Primary Identifier  X Chromosome Location . Start  4885951
Chromosome Location . End  4889575 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07F12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020323 arrd-23 T07F12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07F12.3 T07F12.3 1335   X: 4886242-4886253

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07F12.3.1 4885951 4889575 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231905   180   X: 4885951-4886130 Caenorhabditis elegans
Exon231907   77   X: 4886177-4886253 Caenorhabditis elegans
Exon231908   186   X: 4887130-4887315 Caenorhabditis elegans
Exon231910   105   X: 4887364-4887468 Caenorhabditis elegans
Exon231912   94   X: 4887516-4887609 Caenorhabditis elegans
Exon231914   210   X: 4887658-4887867 Caenorhabditis elegans
Exon231916   98   X: 4887913-4888010 Caenorhabditis elegans
Exon231918   380   X: 4888794-4889173 Caenorhabditis elegans
Exon231920   100   X: 4889222-4889321 Caenorhabditis elegans
Exon231922   198   X: 4889378-4889575 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07F12.3.1 4885951 4889575 1

1 Sequence

Length
1628

1 Sequence Ontology Term

Identifier Name Description
transcript