WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K05B2.2b.2 Sequence Name  K05B2.2b.2
Length (nt)  1392   Chromosome Location  X: 4906131-4912324
Chromosome . Primary Identifier  X Chromosome Location . Start  4906131
Chromosome Location . End  4912324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05B2.2b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019403 K05B2.2 K05B2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05B2.2b K05B2.2b 471   X: 4911210-4911289

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K05B2.2b.2 4906131 4912324 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231959   96   X: 4906131-4906226 Caenorhabditis elegans
Exon231963   149   X: 4907290-4907438 Caenorhabditis elegans
Exon231968   115   X: 4908256-4908370 Caenorhabditis elegans
Exon231976   87   X: 4908430-4908516 Caenorhabditis elegans
Exon231981   129   X: 4908824-4908952 Caenorhabditis elegans
Exon231987   85   X: 4911205-4911289 Caenorhabditis elegans
Exon231996   231   X: 4911346-4911576 Caenorhabditis elegans
Exon232006   500   X: 4911825-4912324 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K05B2.2b.2 4906131 4912324 1

1 Sequence

Length
1392

1 Sequence Ontology Term

Identifier Name Description
transcript