WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K05B2.4.1 Sequence Name  K05B2.4.1
Length (nt)  1376   Chromosome Location  X: 4918988-4920992
Chromosome . Primary Identifier  X Chromosome Location . Start  4918988
Chromosome Location . End  4920992 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05B2.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019404 K05B2.4 K05B2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05B2.4 K05B2.4 1296   X: 4919055-4919200

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K05B2.4.1 4918988 4920992 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232021   213   X: 4918988-4919200 Caenorhabditis elegans
Exon232022   166   X: 4919321-4919486 Caenorhabditis elegans
Exon232023   142   X: 4919533-4919674 Caenorhabditis elegans
Exon232024   89   X: 4919810-4919898 Caenorhabditis elegans
Exon232025   111   X: 4919942-4920052 Caenorhabditis elegans
Exon232026   105   X: 4920097-4920201 Caenorhabditis elegans
Exon232027   217   X: 4920258-4920474 Caenorhabditis elegans
Exon232028   213   X: 4920519-4920731 Caenorhabditis elegans
Exon232029   120   X: 4920873-4920992 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K05B2.4.1 4918988 4920992 -1

1 Sequence

Length
1376

1 Sequence Ontology Term

Identifier Name Description
transcript