WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K05B2.5b.1 Sequence Name  K05B2.5b.1
Length (nt)  2936   Chromosome Location  X: 4921336-4929751
Chromosome . Primary Identifier  X Chromosome Location . Start  4921336
Chromosome Location . End  4929751 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05B2.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003986 mct-4 K05B2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05B2.5b K05B2.5b 2334   X: 4921938-4921967

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K05B2.5b.1 4921336 4929751 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232030   632   X: 4921336-4921967 Caenorhabditis elegans
Exon232036   71   X: 4922018-4922088 Caenorhabditis elegans
Exon232038   135   X: 4922707-4922841 Caenorhabditis elegans
Exon232041   126   X: 4922930-4923055 Caenorhabditis elegans
Exon232044   126   X: 4923105-4923230 Caenorhabditis elegans
Exon232048   162   X: 4923314-4923475 Caenorhabditis elegans
Exon232052   227   X: 4923528-4923754 Caenorhabditis elegans
Exon232056   254   X: 4924199-4924452 Caenorhabditis elegans
Exon232060   293   X: 4924502-4924794 Caenorhabditis elegans
Exon232064   231   X: 4925325-4925555 Caenorhabditis elegans
Exon232068   355   X: 4925604-4925958 Caenorhabditis elegans
Exon232072   143   X: 4926004-4926146 Caenorhabditis elegans
Exon232076   105   X: 4926828-4926932 Caenorhabditis elegans
Exon232078   76   X: 4929676-4929751 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K05B2.5b.1 4921336 4929751 -1

1 Sequence

Length
2936

1 Sequence Ontology Term

Identifier Name Description
transcript